BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034D09SP1|AL429898
(831 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1216 1634 0.0
>3x_Contig1216
Length = 5132
Score = 1634 bits (823), Expect = 0.0
Identities = 828/831 (99%)
Strand = Plus / Minus
Query: 1 gatctatatttttagcgtcaaagcatgcctgttcgacatggatggcttgttaataaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1804 gatctatatttttagcgtcaaagcatgcctgttcgacatggatggcttgttaataaacac 1745
Query: 61 cgaagacatgtacactgttgctataaataaggtcttggaggcacatgacaaaggtactat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1744 cgaagacatgtacactgttgctataaataaggtcttggaggcacatgacaaaggtactat 1685
Query: 121 gtcttgggatctgaagttgcagttgcaaggtttgcctggtccagaagctggccgtaaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1684 gtcttgggatctgaagttgcagttgcaaggtttgcctggtccagaagctggccgtaaggt 1625
Query: 181 tattgaatattatgatttacctttgtcattcgaagaatttgatacgttgaataggaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 tattgaatattatgatttacctttgtcattcgaagaatttgatacgttgaataggaaaca 1565
Query: 241 tcaggcaatcctgtggccaacgagcaaatttctccctggaacattagagcttattgctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 tcaggcaatcctgtggccaacgagcaaatttctccctggaacattagagcttattgctta 1505
Query: 301 cttaaaggaaaggracgttccaattgcgctctgcacctcttccactgtagaaaagttcca 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1504 cttaaaggaaaggaacgttccaattgcgctctgcacctcttccactgtagaaaagttcca 1445
Query: 361 tcataaaacttcccaccttactgaagctttcaaagcattcgacgttataattactggtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1444 tcataaaacttcccaccttactgaagctttcaaagcattcgacgttataattactggtga 1385
Query: 421 cgatcccagaattccaaaaggcagaggtaaaccttttccagatatctggcaactggggtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1384 cgatcccagaattccaaaaggcagaggtaaaccttttccagatatctggcaactggggtt 1325
Query: 481 gaaggaattaaatgctaaattcaacacagatattgagagttacgaatgtctagtctttga 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1324 gaaggaattaaatgctaaattcaacacagatattgagagtaacgaatgtctagtctttga 1265
Query: 541 agatggtattcctggggtcaatgctggaaagagttttggcgcatacgtcatctgggtccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 agatggtattcctggggtcaatgctggaaagagttttggcgcatacgtcatctgggtccc 1205
Query: 601 tcataaaratgcgattgcgctagtcaaagaccacaaaatattaggcgatagaggtgaaat 660
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 tcataaagatgcgattgcgctagtcaaagaccacaaaatattaggcgatagaggtgaaat 1145
Query: 661 gctagaatctttagaacactttgaccgttccaagtttggattatagttaagtaaaagaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 gctagaatctttagaacactttgaccgttccaagtttggattatagttaagtaaaagaga 1085
Query: 721 gtacatatgtcttaactggatttcagacaaaggcatagttaatactcgaagtactttttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 gtacatatgtcttaactggatttcagacaaaggcatagttaatactcgaagtactttttt 1025
Query: 781 gaatagagagattaaataatgtcttcttataagttactacgaacttagttg 831
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 gaatagagagattaaataatgtcttcttataagttactacgaacttagttg 974
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5543
Number of Sequences: 1807
Number of extensions: 5543
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 831
length of database: 10,358,551
effective HSP length: 16
effective length of query: 815
effective length of database: 10,329,639
effective search space: 8418655785
effective search space used: 8418655785
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)